Section: Software and Platforms

Rna3Dmotif

Participant : Alain Denise [correspondant] .

Rna3Dmotif is a free bundle of three easy-to-install programs aimed to be used in combination to automatically extract recurrent RNA local tertiary motifs. The approach used is based on a graph representation of the RNA tertiary structure using LW nomenclature. It was applied to several widely studied ribosomal RNA structures and the motifs thus found were deposited in a dedicated repository.

Impact: Cited in 17 research manuscripts (source: Google Scholar).

Availability: Distributed under the terms of the licence since 24/03/2009 on simple demand to the author(s) at http://rna3dmotif.lri.fr .